Flavivirus research using viscRNA-seq
| Virus type | Sample type | Collection condition | Code | Repository | Reference |
|---|---|---|---|---|---|
| DENV-2, ZIKV | Cell line | Huh7 cells at 4 h, 12 h, 24 h, 48 h post-infection | GSE110496 | GEO | [45] |
| DENV | PBMC | 6 patients and 4 healthy individuals | GSE116672 | GEO | [39] |
| WNV | Cell line | L929 cells at 24 h post-infection | GSE125241 | GEO | [23] |
DENV, dengue virus; GEO, gene expression omnibus; PBMC, peripheral blood mononuclear cell; viscRNA-seq, virus-inclusive single-cell RNA sequencing; WNV, West Nile virus; ZIKV, Zika virus.